Introduction to proBAMr

proBAMsuite, a Bioinformatics Framework for Genome-Based Representation and Analysis of Proteomics Data*

To facilitate genome-based representation and analysis of proteomics data, we developed a new bioinformatics framework, proBAMsuite, in which a central component is the protein BAM (proBAM) file format for organizing peptide spectrum matches (PSMs)(1) within the context of the genome. proBAMsuite also includes two R packages, proBAMr and proBAMtools, for generating and analyzing proBAM files, r...

An Ecocritical Reading of Saʿdī’s “The Mocaddamah; or, Introduction to the Gulistan of Shaikh Sadi”

In his article, “An Ecocritical Reading of Saʿdī’s ‘The Mocaddamah; or, Introduction to the Gulistan of Shaikh Sadi’” Massih Zekavat argues that some aspects of ecological conceptualizations seem to have remained unchanged in Iran since the thirteenth century. He also explores the possibility of applying one of the most recent western critical approaches to a distinguished text in the Persian l...

An Introduction to Sociolinguistics

Research in Echocardiography Education: Introduction to Qualitative Research Methods

Research in Echocardiography Education: Introduction to Qualitative Research Methods

Introduction of a Case of Interstitial Pneumonia Related to Pneumocystis Carinii

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